Iocasia fonsfrigidae NS-1 gen. nov., sp. nov., a Novel Deep-Sea Bacterium Possessing Diverse Carbohydrate Metabolic Pathways

doi:10.3389/fmicb.2021.725159

	Iocasia fonsfrigidae NS-1 gen. nov., sp. nov., a Novel Deep-Sea Bacterium Possessing Diverse Carbohydrate Metabolic Pathways
	Zhang, Jing 1,2,3,4,5,6; Zhang, Yuechao 7; Liu, Rui 1,2,3,5; Cai, Ruining 1,2,3,4,5; Liu, Fanghua7 ; Sun, Chaomin 1,2,3,5
发表期刊	FRONTIERS IN MICROBIOLOGY
	2021-11-24
卷号	12 页码:14
关键词	fermentation hydrogen carbohydrates cold seep microcompartment
DOI	10.3389/fmicb.2021.725159
通讯作者	Sun, Chaomin(sunchaomin@qdio.ac.cn)
英文摘要	Resolving metabolisms of deep-sea microorganisms is crucial for understanding ocean energy cycling. Here, a strictly anaerobic, Gram-negative strain NS-1 was isolated from the deep-sea cold seep in the South China Sea. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain NS-1 was most closely related to the type strain Halocella cellulosilytica DSM 7362(T) (with 92.52% similarity). A combination of phylogenetic, genomic, and physiological traits with strain NS-1, was proposed to be representative of a novel genus in the family Halanaerobiaceae, for which Iocasia fonsfrigidae NS-1 was named. It is noteworthy that I. fonsfrigidae NS-1 could metabolize multiple carbohydrates including xylan, alginate, starch, and lignin, and thereby produce diverse fermentation products such as hydrogen, lactate, butyrate, and ethanol. The expressions of the key genes responsible for carbohydrate degradation as well as the production of the above small molecular substrates when strain NS-1 cultured under different conditions, were further analyzed by transcriptomic methods. We thus predicted that part of the ecological role of Iocasia sp. is likely in the fermentation of products from the degradation of diverse carbohydrates to produce hydrogen as well as other small molecules, which are in turn utilized by other members of cold seep microbes.
资助机构	Strategic Priority Research Program of the Chinese Academy of Sciences ; China Ocean Mineral Resources R&D Association Grant ; National Key R&D Program of China ; Taishan Young Scholar Program of Shandong Province ; Qingdao Innovation Leadership Program
收录类别	SCI
语种	英语
关键词[WOS]	POLYSACCHARIDE UTILIZATION ; MICROBIAL DIVERSITY ; COLD-SEEP ; SEDIMENTS ; CLOSTRIDIA ; ABUNDANCE ; METHANE ; FLUX ; LAKE ; OIL
研究领域[WOS]	Microbiology
WOS记录号	WOS:000738618300001
引用统计	被引频次：3[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/31331
专题	海岸带生物学与生物资源利用重点实验室海岸带生物学与生物资源利用重点实验室_海岸带生物学与生物资源保护实验室
通讯作者	Sun, Chaomin
作者单位	1.Chinese Acad Sci, CAS Key Lab Expt Marine Biol, Qingdao, Peoples R China 2.Chinese Acad Sci, Ctr Deep Sea Res, Inst Oceanol, Qingdao, Peoples R China 3.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China 4.Univ Chinese Acad Sci, Coll Earth Sci, Beijing, Peoples R China 5.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China 6.Hebei Univ, Sch Life Sci, Baoding, Peoples R China 7.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Biol & Biol Resources Utilizat, Yantai, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Jing,Zhang, Yuechao,Liu, Rui,et al. Iocasia fonsfrigidae NS-1 gen. nov., sp. nov., a Novel Deep-Sea Bacterium Possessing Diverse Carbohydrate Metabolic Pathways[J]. FRONTIERS IN MICROBIOLOGY,2021,12:14.
APA	Zhang, Jing,Zhang, Yuechao,Liu, Rui,Cai, Ruining,Liu, Fanghua,&Sun, Chaomin.(2021).Iocasia fonsfrigidae NS-1 gen. nov., sp. nov., a Novel Deep-Sea Bacterium Possessing Diverse Carbohydrate Metabolic Pathways.FRONTIERS IN MICROBIOLOGY,12,14.
MLA	Zhang, Jing,et al."Iocasia fonsfrigidae NS-1 gen. nov., sp. nov., a Novel Deep-Sea Bacterium Possessing Diverse Carbohydrate Metabolic Pathways".FRONTIERS IN MICROBIOLOGY 12(2021):14.