Diversity of phototrophic phytoplankton in Northern South China Sea indicated by rbcL analysis

doi:10.1007/s10811-015-0624-3

YIC-IR > 海岸带生物学与生物资源利用重点实验室 > 海岸带生物学与生物资源保护实验室

	Diversity of phototrophic phytoplankton in Northern South China Sea indicated by rbcL analysis
	Li, N ; Yu, SX; Wang, YC; Li, JL; Li, FC ; Qin, S; Qin, S (reprint author), Chinese Acad Sci, Key Lab Coastal Biol & Biol Resource Utilizat, Yantai Inst Coastal Zone Res, Yantai 264003, Peoples R China.; Li, FC (reprint author), Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China. nli@yic.ac.cn ; sxyu@yic.ac.cn ; lifuchao@qdio.ac.cn ; cpra_yic@sina.com
发表期刊	JOURNAL OF APPLIED PHYCOLOGY
ISSN	0921-8971
	2016-04-01
卷号	28 期号:2 页码:773-781
关键词	Phytoplankton Communities Northern South China Sea Gene Rbcl
DOI	10.1007/s10811-015-0624-3
产权排序	[Li, Nan; Yu, Shu-Xian; Wang, Yin-Chu; Li, Jia-Lin; Qin, Song] Chinese Acad Sci, Key Lab Coastal Biol & Biol Resource Utilizat, Yantai Inst Coastal Zone Res, Yantai 264003, Peoples R China; [Yu, Shu-Xian] Univ Chinese Acad Sci, Beijing 100049, Peoples R China; [Li, Fu-Chao] Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China
作者部门	海岸带生物学与生物资源利用所重点实验室
英文摘要	Ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) as an important enzyme in photosynthetic process exists in various marine phytoplankton. To investigate the photosynthetic phytoplankton communities, conservative encoding gene of RubisCO large subunit (rbcL) was chosen as a target gene in this study. We constructed 33 clone libraries from samples collected in the north of South China Sea (NSCS) and retained 3173 sequences for further analysis. Results of BLASTp showed Stramenopiles and Haptophyta were predominant taxonomic groups in this area, while only five harmful species of Dinophyta were observed. According to the estimators of biodiversity, the photosynthetic community of N709 had very low genetic diversity and richness, which could be explained by the influence of brackish estuarine environment. Beta diversity showed that all samples could be clustered into three groups and those samples with approximately the same distance to land clustered together. Temperature, depth, and latitude of stations as biogeographic factors were indicated to have a significantly positive or negative relation with biodiversity estimators of the phytoplankton community. We concluded that biogeographic factors could be linked with difference in diversity and population of natural phytoplankton assemblages in horizontal surface of NSCS in summer 2007.
文章类型	Article
资助机构	National Natural Science Foundation of China(41176144)
收录类别	SCI
语种	英语
关键词[WOS]	EQUATORIAL PACIFIC-OCEAN ; SALINITY GRADIENT ; SPECIES COMPOSITION ; MAXIMUM-LIKELIHOOD ; RUBISCO GENOTYPES ; RIBOSOMAL DNA ; GENE RBCL ; SEQUENCES ; DINOPHYCEAE ; COMMUNITIES
研究领域[WOS]	Biotechnology & Applied Microbiology ; Marine & Freshwater Biology
WOS记录号	WOS:000372256900007
引用统计	被引频次：13[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/10854
专题	海岸带生物学与生物资源利用重点实验室_海岸带生物学与生物资源保护实验室
通讯作者	Qin, S (reprint author), Chinese Acad Sci, Key Lab Coastal Biol & Biol Resource Utilizat, Yantai Inst Coastal Zone Res, Yantai 264003, Peoples R China.; Li, FC (reprint author), Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China. nli@yic.ac.cn; sxyu@yic.ac.cn; lifuchao@qdio.ac.cn; cpra_yic@sina.com
作者单位	1.Chinese Acad Sci, Key Lab Coastal Biol & Biol Resource Utilizat, Yantai Inst Coastal Zone Res 2.Univ Chinese Acad Sci 3.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol
推荐引用方式 GB/T 7714	Li, N,Yu, SX,Wang, YC,et al. Diversity of phototrophic phytoplankton in Northern South China Sea indicated by rbcL analysis[J]. JOURNAL OF APPLIED PHYCOLOGY,2016,28(2):773-781.
APA	Li, N.,Yu, SX.,Wang, YC.,Li, JL.,Li, FC.,...&cpra_yic@sina.com.(2016).Diversity of phototrophic phytoplankton in Northern South China Sea indicated by rbcL analysis.JOURNAL OF APPLIED PHYCOLOGY,28(2),773-781.
MLA	Li, N,et al."Diversity of phototrophic phytoplankton in Northern South China Sea indicated by rbcL analysis".JOURNAL OF APPLIED PHYCOLOGY 28.2(2016):773-781.

条目包含的文件
文件名称/大小	文献类型	版本类型	开放类型	使用许可
Diversity of phototr（1037KB）	期刊论文	作者接受稿	开放获取	CC BY-NC-SA	浏览请求全文