Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples

doi:10.3389/fpls.2022.1057226

YIC-IR

	Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples
	Wang, Ziqi 1,2; Liu, Shasha 1,2; Huo, Wenping 1,2; Chen, Min3 ; Zhang, Yugang 1,2; Jiang, Shenghui 1,2
发表期刊	FRONTIERS IN PLANT SCIENCE
ISSN	1664-462X
	2022-11-08
卷号	13 页码:13
关键词	transcriptome metabolome apple fruit russeting suberin
DOI	10.3389/fpls.2022.1057226
通讯作者	Zhang, Yugang(jsh2862317@163.com) ; Jiang, Shenghui(ygzhang@qau.edu.cn)
英文摘要	The apple is an economically important fruit, and fruit russeting is not conducive to its appearance. Although studies have examined fruit russeting, its mechanism remains unclear. Two apple strains of the F-1 hybrid population derived from 'Fuji' and 'Golden Delicious' were used in this study. We found that the skin of russet apples was rough and fissured, while that of non-russet apples was smooth and waxy. Chemical staining, LC- and GC-MS showed that both lignin and suberin were increased in russet apple skin. Meanwhile, genes involved in lignin and suberin synthetic pathways were upregulated in russet apple skin. Additionally, we found many differentially expressed genes (DEGs(1)) involved in hormone biosynthesis and signaling and stress responses in the two apple strains. We found that WRKY13 may influence russeting by regulating lignin synthesis. Our study identified several candidate metabolites and genes, which will provide a good foundation for further research.
资助机构	National Natural Science Foundation of China ; Natural Science Foundation of Shandong Province ; National Key Research and Development Program Foundation ; Taishan Scholar Foundation of Shandong Province ; Agricultural Variety Improvement Project of Shandong Province ; Talents of High-level Scientific Research Foundation ; Graduate Innovation Program of Qingdao Agricultural University
收录类别	SCI
语种	英语
关键词[WOS]	GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ; SUBERIN DEPOSITION ; SN-2 PREFERENCE ; FRUIT ; BIOSYNTHESIS ; EXPRESSION ; REGULATOR ; BARRIERS ; FAMILY ; CUTIN
研究领域[WOS]	Plant Sciences
WOS记录号	WOS:000888303500001
引用统计	被引频次：2[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/32383
专题	中国科学院烟台海岸带研究所
通讯作者	Zhang, Yugang; Jiang, Shenghui
作者单位	1.Qingdao Agr Univ, Coll Hort, Qingdao, Peoples R China 2.Engn Lab Genet Improvement Hort Crops Shandong Pro, Qingdao, Peoples R China 3.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai, Peoples R China
推荐引用方式 GB/T 7714	Wang, Ziqi,Liu, Shasha,Huo, Wenping,et al. Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples[J]. FRONTIERS IN PLANT SCIENCE,2022,13:13.
APA	Wang, Ziqi,Liu, Shasha,Huo, Wenping,Chen, Min,Zhang, Yugang,&Jiang, Shenghui.(2022).Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples.FRONTIERS IN PLANT SCIENCE,13,13.
MLA	Wang, Ziqi,et al."Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples".FRONTIERS IN PLANT SCIENCE 13(2022):13.