Transcriptome analysis of acute high temperature-responsive genes and pathways in Palaemon gravieri

doi:10.1016/j.cbd.2021.100958

	Transcriptome analysis of acute high temperature-responsive genes and pathways in Palaemon gravieri
	Shi, Wenjun 1,3; Hu, Runhao 1,2; Wang, Pan 1,2; Zhao, Ran 1,2; Shen, Hui 1; Li, Hui 1; Wang, Libao 1; Qiao, Yi 1; Jiang, Ge 1; Cheng, Jie 1; Wan, Xihe 1
发表期刊	COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS
ISSN	1744-117X
	2022-03-01
卷号	41 页码:13
关键词	Palaemon gravieri Transcriptome Acute high temperature Metabolism Immunity
DOI	10.1016/j.cbd.2021.100958
英文摘要	Temperature is an important variable factor in aquaculture which affects the health, survival, behavior, growth, and development of aquatic animals. Palaemon gravieri is one of the main economic shrimps in marine capture fisheries of the East China Sea and the South China Yellow Sea; however, it cannot tolerate high temperatures, thereby, resulting in unsuccessful large-scale farming. Thus far, there are few studies on the effects of acute high temperature on P. graviera. Therefore, it is especially important to study the effects of temperature fluctuations, especially acute high temperature, on P. gravieri. In this study, P. gravieri was treated with acute high-temperature stress, which gradually rose from 15 ?degrees C to 30 ?degrees C in 3 h, then remained at 30 ?degrees C for 12 h. The hepatopancreas of shrimps from five time points was collected once at 15 ?degrees C and thereafter, every 3 h after 30 ?degrees C. The samples of G0, G1, and G4 were selected for transcriptome analysis. A total of 18,308 unigenes were annotated, of which 7744 were differentially expressed. Most differentially expressed genes (DEGs) come from several physiological and biochemical processes, such as metabolism (GRHPR, ALDH5A1, GDH), immunity (HSP70, Rab5B, Rab10, CASP7), and stress-related process (UGT, GST, HSP60, HSP90). The results indicated that acute high temperature significantly reduced the metabolic capacity of shrimp but enhanced the immune capacity, which seemed to be an emergency metabolic compensation technique to resist stress. This study contributes to ongoing research on the physiological mechanism of P. gravieri response to acute high temperature.
收录类别	SCI
语种	英语
关键词[WOS]	BLACK TIGER SHRIMP ; MOLECULAR-CLONING ; WHITE SHRIMP ; EXPRESSION ANALYSIS ; UDP-GLUCURONOSYLTRANSFERASES ; PENAEUS-MONODON ; DRUG-METABOLISM ; IMMUNE-RESPONSE ; AMINO-ACID ; C-JUN
研究领域[WOS]	Biochemistry & Molecular Biology ; Genetics & Heredity
WOS记录号	WOS:000776076700001
引用统计	被引频次：8[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/31298
专题	中国科学院烟台海岸带研究所知识产出
通讯作者	Wan, Xihe
作者单位	1.Inst Oceanol & Marine Fisheries, 31 Jiaoyu Rd, Nantong 226007, Jiangsu, Peoples R China 2.Shanghai Ocean Univ, Natl Demonstrat Ctr Expt Fisheries Sci Educ, Shanghai, Peoples R China 3.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai, Peoples R China
推荐引用方式 GB/T 7714	Shi, Wenjun,Hu, Runhao,Wang, Pan,et al. Transcriptome analysis of acute high temperature-responsive genes and pathways in Palaemon gravieri[J]. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS,2022,41:13.
APA	Shi, Wenjun.,Hu, Runhao.,Wang, Pan.,Zhao, Ran.,Shen, Hui.,...&Wan, Xihe.(2022).Transcriptome analysis of acute high temperature-responsive genes and pathways in Palaemon gravieri.COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS,41,13.
MLA	Shi, Wenjun,et al."Transcriptome analysis of acute high temperature-responsive genes and pathways in Palaemon gravieri".COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 41(2022):13.