A Meta-Analysis of the Bacterial and Archaeal Diversity Observed in Wetland Soils
Lv, Xiaofei1,2; Yu, Junbao1; Fu, Yuqin1,2; Ma, Bin1; Qu, Fanzhu1; Ning, Kai1,2; Wu, Huifeng1; Yu, JB (reprint author), Univ Chinese Acad Sci, Beijing 100049, Peoples R China. junbao.yu@gmail.com
发表期刊SCIENTIFIC WORLD JOURNAL
ISSN1537-744X
2014
页码437684
关键词Flow Constructed Wetland Ammonia-oxidizing Bacteria Microbial Communities Waste-water Phragmites-australis Chilean Altiplano Tibetan Plateau Zoige Wetland Fresh-water Rna
DOI10.1155/2014/437684
产权排序[Lv, Xiaofei; Yu, Junbao; Fu, Yuqin; Ma, Bin; Qu, Fanzhu; Ning, Kai; Wu, Huifeng] Chinese Acad Sci, Shandong Prov Key Lab Coastal Zone Environm Proc, Key Lab Coastal Zone Environm Proc & Ecol Re, Yantai Inst Coastal Zone Res YIC,YICCAS, Yantai 264003, Peoples R China; [Lv, Xiaofei; Fu, Yuqin; Ning, Kai] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
作者部门中科院海岸带环境过程与生态修复重点实验室
英文摘要This study examined the bacterial and archaeal diversity from a worldwide range of wetlands soils and sediments using a meta-analysis approach. All available 16S rRNA gene sequences recovered from wetlands in public databases were retrieved. In November 2012, a total of 12677 bacterial and 1747 archaeal sequences were collected in GenBank. All the bacterial sequences were assigned into 6383 operational taxonomic units (OTUs 0.03), representing 31 known bacterial phyla, predominant with Proteobacteria (2791 OTUs), Bacteroidetes (868 OTUs), Acidobacteria (731 OTUs), Firmicutes (540 OTUs), and Actinobacteria (418 OTUs). The genus Flavobacterium (11.6% of bacterial sequences) was the dominate bacteria in wetlands, followed by Gp1, Nitrosospira, and Nitrosomonas. Archaeal sequences were assigned to 521 OTUs from phyla Euryarchaeota and Crenarchaeota. The dominating archaeal genera were Fervidicoccus and Methanosaeta. Rarefaction analysis indicated that approximately 40% of bacterial and 83% of archaeal diversity in wetland soils and sediments have been presented. Our results should be significant for well-understanding the microbial diversity involved in worldwide wetlands.; This study examined the bacterial and archaeal diversity from a worldwide range of wetlands soils and sediments using a meta-analysis approach. All available 16S rRNA gene sequences recovered from wetlands in public databases were retrieved. In November 2012, a total of 12677 bacterial and 1747 archaeal sequences were collected in GenBank. All the bacterial sequences were assigned into 6383 operational taxonomic units (OTUs 0.03), representing 31 known bacterial phyla, predominant with Proteobacteria (2791 OTUs), Bacteroidetes (868 OTUs), Acidobacteria (731 OTUs), Firmicutes (540 OTUs), and Actinobacteria (418 OTUs). The genus Flavobacterium (11.6% of bacterial sequences) was the dominate bacteria in wetlands, followed by Gp1, Nitrosospira, and Nitrosomonas. Archaeal sequences were assigned to 521 OTUs from phyla Euryarchaeota and Crenarchaeota. The dominating archaeal genera were Fervidicoccus and Methanosaeta. Rarefaction analysis indicated that approximately 40% of bacterial and 83% of archaeal diversity in wetland soils and sediments have been presented. Our results should be significant for well-understanding the microbial diversity involved in worldwide wetlands.
文章类型Review
资助机构Science & Technology - Other Topics
收录类别SCI
语种英语
关键词[WOS]FLOW CONSTRUCTED WETLAND ; AMMONIA-OXIDIZING BACTERIA ; MICROBIAL COMMUNITIES ; WASTE-WATER ; PHRAGMITES-AUSTRALIS ; CHILEAN ALTIPLANO ; TIBETAN PLATEAU ; ZOIGE WETLAND ; FRESH-WATER ; RNA
研究领域[WOS]Science & Technology - Other Topics
WOS记录号WOS:000337395600001
引用统计
被引频次:59[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.yic.ac.cn/handle/133337/8785
专题中国科学院烟台海岸带研究所知识产出
中国科学院海岸带环境过程与生态修复重点实验室_滨海湿地实验室
中国科学院海岸带环境过程与生态修复重点实验室
通讯作者Yu, JB (reprint author), Univ Chinese Acad Sci, Beijing 100049, Peoples R China. junbao.yu@gmail.com
作者单位1.Chinese Acad Sci, Shandong Prov Key Lab Coastal Zone Environm Proc, Key Lab Coastal Zone Environm Proc & Ecol Re, Yantai Inst Coastal Zone Res YIC,YICCAS, Yantai 264003, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式
GB/T 7714
Lv, Xiaofei,Yu, Junbao,Fu, Yuqin,et al. A Meta-Analysis of the Bacterial and Archaeal Diversity Observed in Wetland Soils[J]. SCIENTIFIC WORLD JOURNAL,2014:437684.
APA Lv, Xiaofei.,Yu, Junbao.,Fu, Yuqin.,Ma, Bin.,Qu, Fanzhu.,...&Yu, JB .(2014).A Meta-Analysis of the Bacterial and Archaeal Diversity Observed in Wetland Soils.SCIENTIFIC WORLD JOURNAL,437684.
MLA Lv, Xiaofei,et al."A Meta-Analysis of the Bacterial and Archaeal Diversity Observed in Wetland Soils".SCIENTIFIC WORLD JOURNAL (2014):437684.
条目包含的文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
A Meta-Analysis of t(1534KB) 开放获取CC BY-NC-SA浏览 请求全文
个性服务
推荐该条目
保存到收藏夹
查看访问统计
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Lv, Xiaofei]的文章
[Yu, Junbao]的文章
[Fu, Yuqin]的文章
百度学术
百度学术中相似的文章
[Lv, Xiaofei]的文章
[Yu, Junbao]的文章
[Fu, Yuqin]的文章
必应学术
必应学术中相似的文章
[Lv, Xiaofei]的文章
[Yu, Junbao]的文章
[Fu, Yuqin]的文章
相关权益政策
暂无数据
收藏/分享
文件名: A Meta-Analysis of the Bacterial and Archaeal Diversity Observed in Wetland Soils.pdf
格式: Adobe PDF
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。