The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects

doi:10.3390/microorganisms10040767

	The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects
	Dong, Xiaoyan 1; Tu, Chen1 ; Xie, Zhihong2 ; Luo, Yongming1,3 ; Zhang, Lei 1,4; Li, Zhaoyi 1
发表期刊	MICROORGANISMS
	2022-04-01
卷号	10 期号:4 页码:14
关键词	PGPR root colonization genome sequencing Bacillus soil-borne pathogens
DOI	10.3390/microorganisms10040767
通讯作者	Xie, Zhihong(zhihongxie211@163.com)
英文摘要	Root colonization and plant probiotic function are important traits of plant growth-promoting rhizobacteria (PGPR). Bacillus velezensis SC60, a plant endophytic strain screened from Sesbania cannabina, has a strong colonization ability on various plant roots, which indicates that SC60 has a preferable adaptability to plants. However, the probiotic function of the strain SC60 is not well-understood. Promoting plant growth and suppressing soil-borne pathogens are key to the plant probiotic functions. In this study, the genetic mechanism of plant growth-promoting and antibacterial activity of the strain SC60 was analyzed by biological and bioinformatics methods. The complete genome size of strain SC60 was 3,962,671 bp, with 4079 predicted genes and an average GC content of 46.46%. SC60 was designated as Bacillus velezensis according to the comparative analysis, including average nucleotide polymorphism (ANI), digital DNA-DNA hybridization (dDDH), and phylogenetic analysis. Genomic secondary metabolite analyses indicated two clusters encoding potential new antimicrobials. The antagonism experiments revealed that strain SC60 had the ability to inhibit the growth of a variety of plant pathogens and its closely related strains of Bacillus spp., which was crucial to the rhizospheric competitiveness and growth-promoting effect of the strain. The present results further suggest that B. velezensis SC60 could be used as a PGPR strain to develop new biocontrol agents or microbial fertilizers.
资助机构	National Natural Science Foundation of China ; National Key Research and Development Program ; Natural Science Foundation of Shandong
收录类别	SCI
语种	英语
关键词[WOS]	SESBANIA-CANNABINA ; AMYLOLIQUEFACIENS ; SUBTILIS ; TOLERANCE ; SEQUENCE ; GENES ; RHIZOBIA ; STRAINS ; GROWTH
研究领域[WOS]	Microbiology
WOS记录号	WOS:000785198700001
引用统计	被引频次：9[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/31289
专题	中国科学院海岸带环境过程与生态修复重点实验室海岸带生物学与生物资源利用重点实验室_海岸带生物学与生物资源保护实验室中国科学院海岸带环境过程与生态修复重点实验室_海岸带环境过程实验室
通讯作者	Xie, Zhihong
作者单位	1.Chinese Acad Sci, Yantai Inst Coastal Zone Res, CAS Key Lab Coastal Environm Proc & Ecol Remediat, Yantai 264003, Peoples R China 2.Shandong Agr Univ, Natl Engn Res Ctr Efficient Utilizat Soil & Ferti, Coll Resources & Environm, Tai An 271000, Shandong, Peoples R China 3.Chinese Acad Sci, Inst Soil Sci, CAS Key Lab Soil Environm & Pollut Remediat, Nanjing 210008, Peoples R China 4.Chinese Acad Sci, Inst Appl Ecol, Shenyang 110016, Peoples R China
推荐引用方式 GB/T 7714	Dong, Xiaoyan,Tu, Chen,Xie, Zhihong,et al. The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects[J]. MICROORGANISMS,2022,10(4):14.
APA	Dong, Xiaoyan,Tu, Chen,Xie, Zhihong,Luo, Yongming,Zhang, Lei,&Li, Zhaoyi.(2022).The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects.MICROORGANISMS,10(4),14.
MLA	Dong, Xiaoyan,et al."The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects".MICROORGANISMS 10.4(2022):14.