Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa
Witkowski, Andrzej1; Li, Chunlian1; Zglobicka, Izabela2; Yu, Shu-xian3; Ashworth, Matt4; Bek, Przemyslaw D.1; Qin, Song3; Tang, Cheng3; Krzywda, Marta1; Ruppel, Manfred5; Theriot, Edward C.4; Jansen, Robert K.4,7; Car, Ana6; Plocinski, Tomasz2; Wang, Yin-chu3; Sabir, Jamal S. M.7; Daniszewska-Kowalczyk, Genowefa1; Kierzek, Agnieszka1; Hajrah, Nahid H.7; Witkowski, A (reprint author)Show the Organization-Enhanced name(s) Univ Szczecin, Palaeoceanol Unit, Fac Geosci, Mickiewicza 18, PL-70383 Szczecin, Poland. witkowsk@univ.szczecin.pl
2016-09-01
发表期刊JOURNAL OF COASTAL RESEARCH
ISSN0749-0208
卷号74页码:166-195
产权排序[ 1 ] Univ Szczecin, Palaeoceanol Unit, Fac Geosci, Mickiewicza 18, PL-70383 Szczecin, Poland;Show the Organization-Enhanced name(s);[ 2 ] Warsaw Univ Technol, Fac Engn & Mat Sci, Warsaw, Poland Show the Organization-Enhanced name(s);[ 3 ] Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai 264003, Shandong, Peoples R China Show the Organization-Enhanced name(s);[ 4 ] Univ Texas Austin, Dept Integrat Biol, Austin, TX 78712 USA Show the Organization-Enhanced name(s);[ 5 ] Goethe Univ Frankfurt, Sect Electron Microscopy, Fac Biol, D-60438 Frankfurt, Germany Show the Organization-Enhanced name(s);[ 6 ] Univ Dubrovnik, Inst Marine & Coastal Res, Damjana Jude 12, HR-20000 Dubrovnik, Croatia Show the Organization-Enhanced name(s);[ 7 ] King Abdulaziz Univ, Fac Sci, Dept Biol Sci, Biotechnol Res Grp, Jeddah 21589, Saudi Arabia
摘要Diatoms are important contributors to the benthic microeukaryote flora. This manuscript lays the foundation for future metagenomic and environmental sequencing projects off coastal China by curating diatom DNA sequences from the Yantai region of the Bohai and Yellow Seas (Northeast China). These studies are based on cultures established from samples collected in different seasons from marine littoral and supralittoral zones in 2013 and 2014. Thirty-six diatom strains were cultured successfully and identification of these clones was determined by light and scanning electron microscopy(LM and SEM) and DNA sequencing of the nuclear-encoded small subunit ribosomal RNA (SSU) and chloroplast-encoded rbcL and psbC genes. The strains primarily represent raphid pennate genera, such as Amphora, Amphora (Oxyamphora), Caloneis, Diploneis, Halamphora, Navicula, Nitzschia, Parlibellus, Pleurosigma, Surirella and Tryblionella. When the DNA markers from these strains were analysed in a multi-gene phylogeny, we found that some clones-particularly within the genera Amphora, Navicula and Nitzschia-show greater than expected genetic diversity despite their very similar morphology and morphometrics. We also compared the molecular and morphological identities of several seemingly ubiquitous marine littoral taxa in the genera Amphora and Nitzschia from the Indian Ocean and Atlantic Ocean, the Red Sea and Adriatic Sea to their Yellow Sea counterparts.
关键词Diatoms (Bacillariophyta) Bohai Sea Yellow Sea Littoral Zone Metagenomics Biodiversity Multigene Approach (Rbcl Biogeography Psbc Ubiquistic Taxa Ssu) Red Sea Adriatic Sea
作者部门海岸带生物学与生物资源利用所重点实验室
学科领域Environmental Sciences & Ecology ; Physical Geography ; Geology
DOI10.2112/SI74-016.1
项目资助者Polish National Science Centre in Cracow(N2012/04/A/ST10/00544 ; Polish Ministry of Science and Higher Education ; Chinese Academy of Sciences President's International Fellowship Initiative (PIFI) ; 2012/07/N/NZ8/02359)
收录类别SCI
关键词[WOS]NITZSCHIA SPECIES BACILLARIOPHYCEAE ; SP-NOV BACILLARIOPHYTA ; MOLECULAR PHYLOGENY ; DIATOMS BACILLARIOPHYTA ; BARCODING DIATOMS ; INTERTIDAL ZONE ; SOUTHERN CHINA ; XIAMEN BAY ; DIVERSITY ; MORPHOLOGY
文章类型Article
语种英语
WOS研究方向Environmental Sciences; Geography, Physical; Geosciences, Multidisciplinary
WOS记录号WOS:000383795300017
引用统计
被引频次:4[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.yic.ac.cn/handle/133337/17205
专题海岸带生物学与生物资源利用所重点实验室
通讯作者Witkowski, A (reprint author)Show the Organization-Enhanced name(s) Univ Szczecin, Palaeoceanol Unit, Fac Geosci, Mickiewicza 18, PL-70383 Szczecin, Poland. witkowsk@univ.szczecin.pl
作者单位1.Univ Szczecin, Palaeoceanol Unit, Fac Geosci, Mickiewicza 18, PL-70383 Szczecin, Poland
2.Warsaw Univ Technol, Fac Engn & Mat Sci, Warsaw, Poland
3.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai 264003, Shandong, Peoples R China
4.Univ Texas Austin, Dept Integrat Biol, Austin, TX 78712 USA
5.Goethe Univ Frankfurt, Sect Electron Microscopy, Fac Biol, D-60438 Frankfurt, Germany
6.Univ Dubrovnik, Inst Marine & Coastal Res, Damjana Jude 12, HR-20000 Dubrovnik, Croatia
7.King Abdulaziz Univ, Fac Sci, Dept Biol Sci, Biotechnol Res Grp, Jeddah 21589, Saudi Arabia
推荐引用方式
GB/T 7714
Witkowski, Andrzej,Li, Chunlian,Zglobicka, Izabela,et al. Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa[J]. JOURNAL OF COASTAL RESEARCH,2016,74:166-195.
APA Witkowski, Andrzej.,Li, Chunlian.,Zglobicka, Izabela.,Yu, Shu-xian.,Ashworth, Matt.,...&Witkowski, A .(2016).Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa.JOURNAL OF COASTAL RESEARCH,74,166-195.
MLA Witkowski, Andrzej,et al."Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa".JOURNAL OF COASTAL RESEARCH 74(2016):166-195.
条目包含的文件 下载所有文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
Multigene Assessment(1945KB)期刊论文作者接受稿开放获取CC BY-NC-SA浏览 下载
个性服务
推荐该条目
保存到收藏夹
查看访问统计
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Witkowski, Andrzej]的文章
[Li, Chunlian]的文章
[Zglobicka, Izabela]的文章
百度学术
百度学术中相似的文章
[Witkowski, Andrzej]的文章
[Li, Chunlian]的文章
[Zglobicka, Izabela]的文章
必应学术
必应学术中相似的文章
[Witkowski, Andrzej]的文章
[Li, Chunlian]的文章
[Zglobicka, Izabela]的文章
相关权益政策
暂无数据
收藏/分享
文件名: Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa.pdf
格式: Adobe PDF
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。